Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VimP20152 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.73■□□□□ 0.91
VimP20152 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VimP20152 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VimP20152 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.73■□□□□ 0.91
VimP20152 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VimP20152 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VimP20152 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
VimP20152 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VimP20152 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VimP20152 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VimP20152 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
VimP20152 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VimP20152 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.72■□□□□ 0.91
VimP20152 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VimP20152 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VimP20152 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VimP20152 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VimP20152 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VimP20152 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VimP20152 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VimP20152 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VimP20152 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.71■□□□□ 0.91
VimP20152 Gm45364-201ENSMUST00000210883 159 ntBASIC20.71■□□□□ 0.91
VimP20152 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.71■□□□□ 0.91
VimP20152 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VimP20152 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VimP20152 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
VimP20152 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VimP20152 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VimP20152 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VimP20152 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
VimP20152 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
VimP20152 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VimP20152 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VimP20152 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VimP20152 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VimP20152 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VimP20152 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.69■□□□□ 0.9
VimP20152 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VimP20152 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
VimP20152 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.69■□□□□ 0.9
VimP20152 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.69■□□□□ 0.9
VimP20152 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VimP20152 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
VimP20152 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
VimP20152 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VimP20152 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VimP20152 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VimP20152 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VimP20152 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VimP20152 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VimP20152 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VimP20152 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
VimP20152 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VimP20152 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VimP20152 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VimP20152 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VimP20152 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.67■□□□□ 0.9
VimP20152 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.67■□□□□ 0.9
VimP20152 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VimP20152 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.67■□□□□ 0.9
VimP20152 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VimP20152 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VimP20152 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VimP20152 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VimP20152 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VimP20152 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VimP20152 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VimP20152 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VimP20152 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VimP20152 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VimP20152 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
VimP20152 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
VimP20152 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VimP20152 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
VimP20152 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VimP20152 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
VimP20152 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VimP20152 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VimP20152 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VimP20152 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.64■□□□□ 0.89
VimP20152 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VimP20152 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.64■□□□□ 0.89
VimP20152 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VimP20152 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VimP20152 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VimP20152 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VimP20152 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VimP20152 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VimP20152 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VimP20152 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VimP20152 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VimP20152 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VimP20152 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VimP20152 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VimP20152 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VimP20152 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VimP20152 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.63■□□□□ 0.89
VimP20152 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms