Protein–RNA interactions for Protein: P0DN34

Ndufb1, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb1P0DN34 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Ndufb1P0DN34 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ndufb1P0DN34 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ndufb1P0DN34 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ndufb1P0DN34 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ndufb1P0DN34 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ndufb1P0DN34 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Ndufb1P0DN34 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ndufb1P0DN34 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ndufb1P0DN34 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ndufb1P0DN34 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC11.51□□□□□ -0.57
Ndufb1P0DN34 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ndufb1P0DN34 Gm23366-201ENSMUST00000175022 89 ntBASIC11.51□□□□□ -0.57
Ndufb1P0DN34 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ndufb1P0DN34 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Ndufb1P0DN34 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC11.51□□□□□ -0.57
Ndufb1P0DN34 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ndufb1P0DN34 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ndufb1P0DN34 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ndufb1P0DN34 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndufb1P0DN34 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndufb1P0DN34 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndufb1P0DN34 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndufb1P0DN34 AC153962.1-201ENSMUST00000218530 1948 ntBASIC11.47□□□□□ -0.57
Ndufb1P0DN34 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndufb1P0DN34 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndufb1P0DN34 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndufb1P0DN34 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndufb1P0DN34 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndufb1P0DN34 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ndufb1P0DN34 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndufb1P0DN34 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndufb1P0DN34 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Ndufb1P0DN34 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ndufb1P0DN34 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ndufb1P0DN34 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ndufb1P0DN34 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndufb1P0DN34 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ndufb1P0DN34 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndufb1P0DN34 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndufb1P0DN34 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndufb1P0DN34 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndufb1P0DN34 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ndufb1P0DN34 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndufb1P0DN34 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndufb1P0DN34 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms