Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.42■□□□□ 0.7
Col4a2P08122 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.42■□□□□ 0.7
Col4a2P08122 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a2P08122 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a2P08122 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a2P08122 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a2P08122 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a2P08122 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a2P08122 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a2P08122 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a2P08122 Gm10849-201ENSMUST00000100397 618 ntBASIC19.4■□□□□ 0.7
Col4a2P08122 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a2P08122 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Col4a2P08122 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col4a2P08122 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.4■□□□□ 0.7
Col4a2P08122 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Col4a2P08122 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a2P08122 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col4a2P08122 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.39■□□□□ 0.7
Col4a2P08122 Gm43530-201ENSMUST00000195920 274 ntBASIC19.39■□□□□ 0.7
Col4a2P08122 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Col4a2P08122 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a2P08122 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a2P08122 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a2P08122 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Col4a2P08122 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a2P08122 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a2P08122 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Col4a2P08122 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a2P08122 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a2P08122 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a2P08122 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a2P08122 Gm10493-201ENSMUST00000097270 612 ntBASIC19.38■□□□□ 0.69
Col4a2P08122 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.38■□□□□ 0.69
Col4a2P08122 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col4a2P08122 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.38■□□□□ 0.69
Col4a2P08122 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a2P08122 Gm26833-201ENSMUST00000180899 440 ntBASIC19.37■□□□□ 0.69
Col4a2P08122 Gm7291-201ENSMUST00000199147 382 ntBASIC19.37■□□□□ 0.69
Col4a2P08122 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a2P08122 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a2P08122 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a2P08122 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a2P08122 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a2P08122 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
Col4a2P08122 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.36■□□□□ 0.69
Col4a2P08122 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col4a2P08122 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a2P08122 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col4a2P08122 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.35■□□□□ 0.69
Col4a2P08122 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.35■□□□□ 0.69
Col4a2P08122 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Col4a2P08122 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.35■□□□□ 0.69
Col4a2P08122 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a2P08122 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.34■□□□□ 0.69
Col4a2P08122 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a2P08122 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a2P08122 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a2P08122 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a2P08122 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.34■□□□□ 0.69
Col4a2P08122 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Col4a2P08122 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a2P08122 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.34■□□□□ 0.69
Col4a2P08122 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
Col4a2P08122 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
Col4a2P08122 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a2P08122 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Col4a2P08122 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a2P08122 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a2P08122 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.33■□□□□ 0.68
Col4a2P08122 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Col4a2P08122 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a2P08122 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.33■□□□□ 0.68
Col4a2P08122 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a2P08122 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a2P08122 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a2P08122 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
Col4a2P08122 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a2P08122 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.32■□□□□ 0.68
Col4a2P08122 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a2P08122 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a2P08122 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.32■□□□□ 0.68
Col4a2P08122 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a2P08122 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col4a2P08122 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a2P08122 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.31■□□□□ 0.68
Col4a2P08122 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a2P08122 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a2P08122 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms