Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt1P04104 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt1P04104 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.33■□□□□ 0.69
Krt1P04104 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Krt1P04104 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt1P04104 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt1P04104 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt1P04104 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt1P04104 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Krt1P04104 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt1P04104 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt1P04104 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.33■□□□□ 0.68
Krt1P04104 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.32■□□□□ 0.68
Krt1P04104 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt1P04104 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt1P04104 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt1P04104 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Krt1P04104 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt1P04104 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.32■□□□□ 0.68
Krt1P04104 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt1P04104 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt1P04104 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt1P04104 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt1P04104 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt1P04104 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt1P04104 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Krt1P04104 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.3■□□□□ 0.68
Krt1P04104 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.3■□□□□ 0.68
Krt1P04104 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Krt1P04104 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt1P04104 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt1P04104 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.3■□□□□ 0.68
Krt1P04104 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Krt1P04104 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.3■□□□□ 0.68
Krt1P04104 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Krt1P04104 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt1P04104 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Krt1P04104 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.29■□□□□ 0.68
Krt1P04104 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Krt1P04104 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.29■□□□□ 0.68
Krt1P04104 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt1P04104 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.29■□□□□ 0.68
Krt1P04104 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Krt1P04104 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.28■□□□□ 0.68
Krt1P04104 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt1P04104 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Krt1P04104 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt1P04104 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Krt1P04104 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt1P04104 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt1P04104 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt1P04104 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt1P04104 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Krt1P04104 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.27■□□□□ 0.68
Krt1P04104 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Krt1P04104 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt1P04104 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt1P04104 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.26■□□□□ 0.67
Krt1P04104 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Krt1P04104 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt1P04104 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.26■□□□□ 0.67
Krt1P04104 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt1P04104 Gm44428-201ENSMUST00000204474 874 ntBASIC19.26■□□□□ 0.67
Krt1P04104 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Krt1P04104 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt1P04104 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt1P04104 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt1P04104 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt1P04104 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt1P04104 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt1P04104 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.25■□□□□ 0.67
Krt1P04104 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Krt1P04104 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt1P04104 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Krt1P04104 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Krt1P04104 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt1P04104 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt1P04104 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt1P04104 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Krt1P04104 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt1P04104 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt1P04104 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt1P04104 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt1P04104 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt1P04104 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt1P04104 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms