Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01852 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P01852 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
P01852 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
P01852 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01852 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01852 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01852 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
P01852 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.64■□□□□ 0.57
P01852 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
P01852 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P01852 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01852 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01852 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
P01852 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.62■□□□□ 0.57
P01852 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.62■□□□□ 0.57
P01852 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.62■□□□□ 0.57
P01852 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.62■□□□□ 0.57
P01852 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P01852 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P01852 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P01852 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P01852 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P01852 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
P01852 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
P01852 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01852 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01852 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01852 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01852 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.61■□□□□ 0.57
P01852 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01852 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01852 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01852 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01852 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
P01852 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01852 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01852 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P01852 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
P01852 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01852 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01852 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01852 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.59■□□□□ 0.57
P01852 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01852 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01852 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01852 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.59■□□□□ 0.57
P01852 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P01852 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
P01852 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01852 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01852 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01852 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01852 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
P01852 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P01852 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
P01852 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P01852 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
P01852 Gm12922-201ENSMUST00000120626 809 ntBASIC18.58■□□□□ 0.56
P01852 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.58■□□□□ 0.56
P01852 Gm9870-201ENSMUST00000063874 645 ntBASIC18.58■□□□□ 0.56
P01852 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
P01852 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01852 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
P01852 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.57■□□□□ 0.56
P01852 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01852 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01852 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01852 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
P01852 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.57■□□□□ 0.56
P01852 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01852 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01852 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
P01852 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01852 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01852 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
P01852 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P01852 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01852 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01852 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
P01852 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01852 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
P01852 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01852 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
P01852 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01852 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01852 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01852 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
P01852 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
P01852 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01852 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01852 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.55■□□□□ 0.56
P01852 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P01852 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.55■□□□□ 0.56
P01852 Gm7143-201ENSMUST00000222811 859 ntBASIC18.55■□□□□ 0.56
P01852 Gm9847-201ENSMUST00000052528 599 ntBASIC18.55■□□□□ 0.56
P01852 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01852 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01852 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
P01852 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms