Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Syn1O88935 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Syn1O88935 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.21■□□□□ 0.99
Syn1O88935 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.21■□□□□ 0.99
Syn1O88935 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.21■□□□□ 0.99
Syn1O88935 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.21■□□□□ 0.99
Syn1O88935 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Syn1O88935 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Syn1O88935 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Syn1O88935 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Syn1O88935 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syn1O88935 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Syn1O88935 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.2■□□□□ 0.98
Syn1O88935 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syn1O88935 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Syn1O88935 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syn1O88935 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
Syn1O88935 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Syn1O88935 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Syn1O88935 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Syn1O88935 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Syn1O88935 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
Syn1O88935 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Syn1O88935 Gm7143-201ENSMUST00000222811 859 ntBASIC21.19■□□□□ 0.98
Syn1O88935 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
Syn1O88935 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Syn1O88935 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Syn1O88935 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Syn1O88935 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Syn1O88935 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Syn1O88935 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Syn1O88935 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.18■□□□□ 0.98
Syn1O88935 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Syn1O88935 Gm12933-201ENSMUST00000120203 872 ntBASIC21.17■□□□□ 0.98
Syn1O88935 Smad6-203ENSMUST00000179458 273 ntBASIC21.17■□□□□ 0.98
Syn1O88935 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.17■□□□□ 0.98
Syn1O88935 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syn1O88935 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syn1O88935 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Syn1O88935 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Syn1O88935 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syn1O88935 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syn1O88935 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.16■□□□□ 0.98
Syn1O88935 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Syn1O88935 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.16■□□□□ 0.98
Syn1O88935 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syn1O88935 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Syn1O88935 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syn1O88935 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Syn1O88935 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Syn1O88935 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.14■□□□□ 0.98
Syn1O88935 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syn1O88935 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syn1O88935 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.14■□□□□ 0.97
Syn1O88935 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.14■□□□□ 0.97
Syn1O88935 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.14■□□□□ 0.97
Syn1O88935 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syn1O88935 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syn1O88935 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syn1O88935 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syn1O88935 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Syn1O88935 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Syn1O88935 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syn1O88935 Gm10653-202ENSMUST00000139570 835 ntBASIC21.13■□□□□ 0.97
Syn1O88935 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syn1O88935 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Syn1O88935 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syn1O88935 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syn1O88935 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syn1O88935 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syn1O88935 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syn1O88935 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Syn1O88935 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.12■□□□□ 0.97
Syn1O88935 Gm10252-201ENSMUST00000209541 832 ntBASIC21.12■□□□□ 0.97
Syn1O88935 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syn1O88935 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syn1O88935 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syn1O88935 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Syn1O88935 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.12■□□□□ 0.97
Syn1O88935 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.11■□□□□ 0.97
Syn1O88935 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Syn1O88935 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Syn1O88935 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Syn1O88935 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Syn1O88935 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syn1O88935 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.1■□□□□ 0.97
Syn1O88935 Mir7071-201ENSMUST00000184847 69 ntBASIC21.1■□□□□ 0.97
Syn1O88935 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.1■□□□□ 0.97
Syn1O88935 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.1■□□□□ 0.97
Syn1O88935 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syn1O88935 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syn1O88935 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Syn1O88935 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Syn1O88935 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.09■□□□□ 0.97
Syn1O88935 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syn1O88935 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syn1O88935 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Syn1O88935 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syn1O88935 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syn1O88935 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms