Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Slc6a20bO88575 Gm42778-201ENSMUST00000199644 553 ntBASIC22.58■■□□□ 1.21
Slc6a20bO88575 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Slc6a20bO88575 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Slc6a20bO88575 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Slc6a20bO88575 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a20bO88575 Gm10602-201ENSMUST00000098239 609 ntBASIC22.57■■□□□ 1.2
Slc6a20bO88575 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a20bO88575 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a20bO88575 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.57■■□□□ 1.2
Slc6a20bO88575 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc6a20bO88575 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Slc6a20bO88575 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.56■■□□□ 1.2
Slc6a20bO88575 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc6a20bO88575 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc6a20bO88575 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc6a20bO88575 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc6a20bO88575 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc6a20bO88575 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.56■■□□□ 1.2
Slc6a20bO88575 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a20bO88575 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a20bO88575 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.55■■□□□ 1.2
Slc6a20bO88575 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
Slc6a20bO88575 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a20bO88575 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a20bO88575 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.54■■□□□ 1.2
Slc6a20bO88575 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a20bO88575 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Slc6a20bO88575 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a20bO88575 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Slc6a20bO88575 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Slc6a20bO88575 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a20bO88575 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a20bO88575 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a20bO88575 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a20bO88575 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC22.53■■□□□ 1.2
Slc6a20bO88575 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc6a20bO88575 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Slc6a20bO88575 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.53■■□□□ 1.2
Slc6a20bO88575 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a20bO88575 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a20bO88575 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a20bO88575 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a20bO88575 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc6a20bO88575 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc6a20bO88575 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc6a20bO88575 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Slc6a20bO88575 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc6a20bO88575 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.51■■□□□ 1.19
Slc6a20bO88575 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a20bO88575 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.5■■□□□ 1.19
Slc6a20bO88575 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a20bO88575 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.5■■□□□ 1.19
Slc6a20bO88575 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a20bO88575 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a20bO88575 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a20bO88575 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a20bO88575 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Slc6a20bO88575 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.49■■□□□ 1.19
Slc6a20bO88575 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Slc6a20bO88575 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.49■■□□□ 1.19
Slc6a20bO88575 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a20bO88575 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.49■■□□□ 1.19
Slc6a20bO88575 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a20bO88575 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Slc6a20bO88575 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a20bO88575 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.48■■□□□ 1.19
Slc6a20bO88575 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.48■■□□□ 1.19
Slc6a20bO88575 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a20bO88575 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Slc6a20bO88575 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a20bO88575 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a20bO88575 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a20bO88575 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Slc6a20bO88575 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.47■■□□□ 1.19
Slc6a20bO88575 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Slc6a20bO88575 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Slc6a20bO88575 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Slc6a20bO88575 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.47■■□□□ 1.19
Slc6a20bO88575 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Slc6a20bO88575 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Slc6a20bO88575 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Slc6a20bO88575 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Slc6a20bO88575 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Slc6a20bO88575 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.46■■□□□ 1.19
Slc6a20bO88575 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.46■■□□□ 1.19
Slc6a20bO88575 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Slc6a20bO88575 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Slc6a20bO88575 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.45■■□□□ 1.18
Slc6a20bO88575 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.45■■□□□ 1.18
Slc6a20bO88575 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.45■■□□□ 1.18
Slc6a20bO88575 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a20bO88575 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a20bO88575 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a20bO88575 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a20bO88575 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Slc6a20bO88575 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Slc6a20bO88575 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Slc6a20bO88575 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.44■■□□□ 1.18
Slc6a20bO88575 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms