Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shoc2O88520 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Shoc2O88520 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shoc2O88520 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Shoc2O88520 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shoc2O88520 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.12■□□□□ 0.97
Shoc2O88520 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Shoc2O88520 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.12■□□□□ 0.97
Shoc2O88520 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shoc2O88520 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shoc2O88520 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shoc2O88520 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Shoc2O88520 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shoc2O88520 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shoc2O88520 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shoc2O88520 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shoc2O88520 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shoc2O88520 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shoc2O88520 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shoc2O88520 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shoc2O88520 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.11■□□□□ 0.97
Shoc2O88520 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.11■□□□□ 0.97
Shoc2O88520 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Shoc2O88520 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Shoc2O88520 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shoc2O88520 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shoc2O88520 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shoc2O88520 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shoc2O88520 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Shoc2O88520 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.1■□□□□ 0.97
Shoc2O88520 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shoc2O88520 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shoc2O88520 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shoc2O88520 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shoc2O88520 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shoc2O88520 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Shoc2O88520 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Shoc2O88520 Etf1-202ENSMUST00000180351 108 ntBASIC21.09■□□□□ 0.97
Shoc2O88520 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.09■□□□□ 0.97
Shoc2O88520 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Shoc2O88520 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shoc2O88520 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Shoc2O88520 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shoc2O88520 Gm40881-201ENSMUST00000223397 166 ntBASIC21.08■□□□□ 0.97
Shoc2O88520 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shoc2O88520 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shoc2O88520 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shoc2O88520 Gm14117-201ENSMUST00000122417 843 ntBASIC21.07■□□□□ 0.96
Shoc2O88520 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.07■□□□□ 0.96
Shoc2O88520 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.07■□□□□ 0.96
Shoc2O88520 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.07■□□□□ 0.96
Shoc2O88520 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.07■□□□□ 0.96
Shoc2O88520 Rps24-207ENSMUST00000224568 714 ntBASIC21.07■□□□□ 0.96
Shoc2O88520 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shoc2O88520 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shoc2O88520 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shoc2O88520 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shoc2O88520 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Shoc2O88520 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Shoc2O88520 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shoc2O88520 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Shoc2O88520 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Shoc2O88520 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shoc2O88520 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shoc2O88520 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shoc2O88520 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Shoc2O88520 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shoc2O88520 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shoc2O88520 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Shoc2O88520 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shoc2O88520 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.05■□□□□ 0.96
Shoc2O88520 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shoc2O88520 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shoc2O88520 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shoc2O88520 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shoc2O88520 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shoc2O88520 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Shoc2O88520 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.04■□□□□ 0.96
Shoc2O88520 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shoc2O88520 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shoc2O88520 Gm45102-201ENSMUST00000207427 857 ntBASIC21.04■□□□□ 0.96
Shoc2O88520 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shoc2O88520 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shoc2O88520 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.04■□□□□ 0.96
Shoc2O88520 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.03■□□□□ 0.96
Shoc2O88520 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shoc2O88520 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shoc2O88520 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shoc2O88520 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Shoc2O88520 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.03■□□□□ 0.96
Shoc2O88520 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shoc2O88520 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shoc2O88520 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shoc2O88520 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shoc2O88520 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Shoc2O88520 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.02■□□□□ 0.96
Shoc2O88520 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shoc2O88520 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shoc2O88520 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shoc2O88520 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms