Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnmt3bO88509 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Dnmt3bO88509 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnmt3bO88509 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Dnmt3bO88509 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.65■□□□□ 0.74
Dnmt3bO88509 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Dnmt3bO88509 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnmt3bO88509 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnmt3bO88509 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Dnmt3bO88509 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnmt3bO88509 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.65■□□□□ 0.74
Dnmt3bO88509 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.65■□□□□ 0.74
Dnmt3bO88509 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Dnmt3bO88509 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Dnmt3bO88509 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dnmt3bO88509 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Dnmt3bO88509 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dnmt3bO88509 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Dnmt3bO88509 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dnmt3bO88509 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dnmt3bO88509 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnmt3bO88509 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnmt3bO88509 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnmt3bO88509 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Dnmt3bO88509 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.63■□□□□ 0.73
Dnmt3bO88509 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Dnmt3bO88509 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnmt3bO88509 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnmt3bO88509 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dnmt3bO88509 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dnmt3bO88509 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.62■□□□□ 0.73
Dnmt3bO88509 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dnmt3bO88509 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Dnmt3bO88509 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dnmt3bO88509 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dnmt3bO88509 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dnmt3bO88509 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Dnmt3bO88509 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.61■□□□□ 0.73
Dnmt3bO88509 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnmt3bO88509 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnmt3bO88509 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Dnmt3bO88509 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnmt3bO88509 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.61■□□□□ 0.73
Dnmt3bO88509 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnmt3bO88509 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnmt3bO88509 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnmt3bO88509 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnmt3bO88509 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnmt3bO88509 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dnmt3bO88509 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Dnmt3bO88509 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.6■□□□□ 0.73
Dnmt3bO88509 Gm7417-201ENSMUST00000192950 473 ntBASIC19.6■□□□□ 0.73
Dnmt3bO88509 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Dnmt3bO88509 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dnmt3bO88509 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.6■□□□□ 0.73
Dnmt3bO88509 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Dnmt3bO88509 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Dnmt3bO88509 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Dnmt3bO88509 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Dnmt3bO88509 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Dnmt3bO88509 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.59■□□□□ 0.73
Dnmt3bO88509 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Dnmt3bO88509 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Dnmt3bO88509 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Dnmt3bO88509 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Dnmt3bO88509 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.58■□□□□ 0.72
Dnmt3bO88509 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Dnmt3bO88509 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Dnmt3bO88509 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dnmt3bO88509 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dnmt3bO88509 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.57■□□□□ 0.72
Dnmt3bO88509 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.57■□□□□ 0.72
Dnmt3bO88509 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.57■□□□□ 0.72
Dnmt3bO88509 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dnmt3bO88509 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Dnmt3bO88509 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Dnmt3bO88509 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms