Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf17O88472 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.15■□□□□ 0.66
Tnfrsf17O88472 Mir7071-201ENSMUST00000184847 69 ntBASIC19.15■□□□□ 0.66
Tnfrsf17O88472 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf17O88472 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf17O88472 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tnfrsf17O88472 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf17O88472 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Tnfrsf17O88472 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf17O88472 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf17O88472 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnfrsf17O88472 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnfrsf17O88472 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf17O88472 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf17O88472 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf17O88472 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf17O88472 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf17O88472 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf17O88472 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf17O88472 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf17O88472 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf17O88472 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.13■□□□□ 0.65
Tnfrsf17O88472 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf17O88472 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf17O88472 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf17O88472 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf17O88472 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tnfrsf17O88472 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf17O88472 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.12■□□□□ 0.65
Tnfrsf17O88472 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.12■□□□□ 0.65
Tnfrsf17O88472 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tnfrsf17O88472 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf17O88472 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tnfrsf17O88472 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Tnfrsf17O88472 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf17O88472 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.11■□□□□ 0.65
Tnfrsf17O88472 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf17O88472 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfrsf17O88472 Gm20760-201ENSMUST00000179197 648 ntBASIC19.1■□□□□ 0.65
Tnfrsf17O88472 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfrsf17O88472 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Tnfrsf17O88472 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.1■□□□□ 0.65
Tnfrsf17O88472 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.09■□□□□ 0.65
Tnfrsf17O88472 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
Tnfrsf17O88472 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Tnfrsf17O88472 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfrsf17O88472 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.09■□□□□ 0.65
Tnfrsf17O88472 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.09■□□□□ 0.65
Tnfrsf17O88472 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfrsf17O88472 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfrsf17O88472 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfrsf17O88472 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Tnfrsf17O88472 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfrsf17O88472 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnfrsf17O88472 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Tnfrsf17O88472 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.08■□□□□ 0.65
Tnfrsf17O88472 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnfrsf17O88472 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.08■□□□□ 0.65
Tnfrsf17O88472 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnfrsf17O88472 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnfrsf17O88472 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.08■□□□□ 0.64
Tnfrsf17O88472 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfrsf17O88472 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfrsf17O88472 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfrsf17O88472 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.08■□□□□ 0.64
Tnfrsf17O88472 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf17O88472 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf17O88472 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf17O88472 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf17O88472 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf17O88472 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfrsf17O88472 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Tnfrsf17O88472 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfrsf17O88472 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Tnfrsf17O88472 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfrsf17O88472 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfrsf17O88472 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfrsf17O88472 Gm9988-201ENSMUST00000069786 435 ntBASIC19.06■□□□□ 0.64
Tnfrsf17O88472 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfrsf17O88472 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfrsf17O88472 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf17O88472 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf17O88472 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf17O88472 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.05■□□□□ 0.64
Tnfrsf17O88472 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf17O88472 Gm11421-201ENSMUST00000122124 294 ntBASIC19.05■□□□□ 0.64
Tnfrsf17O88472 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.05■□□□□ 0.64
Tnfrsf17O88472 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
Tnfrsf17O88472 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf17O88472 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Tnfrsf17O88472 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf17O88472 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.04■□□□□ 0.64
Tnfrsf17O88472 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Tnfrsf17O88472 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.04■□□□□ 0.64
Tnfrsf17O88472 Gm8520-201ENSMUST00000186517 868 ntBASIC19.04■□□□□ 0.64
Tnfrsf17O88472 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf17O88472 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf17O88472 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf17O88472 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms