Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh5O55240 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh5O55240 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh5O55240 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh5O55240 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh5O55240 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.34■□□□□ 0.69
Rdh5O55240 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.34■□□□□ 0.69
Rdh5O55240 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.34■□□□□ 0.69
Rdh5O55240 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh5O55240 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh5O55240 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Rdh5O55240 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh5O55240 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rdh5O55240 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rdh5O55240 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.33■□□□□ 0.69
Rdh5O55240 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Rdh5O55240 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh5O55240 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.33■□□□□ 0.68
Rdh5O55240 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh5O55240 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh5O55240 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh5O55240 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh5O55240 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh5O55240 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh5O55240 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Rdh5O55240 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.32■□□□□ 0.68
Rdh5O55240 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh5O55240 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh5O55240 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh5O55240 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh5O55240 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh5O55240 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.32■□□□□ 0.68
Rdh5O55240 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.32■□□□□ 0.68
Rdh5O55240 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.32■□□□□ 0.68
Rdh5O55240 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh5O55240 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh5O55240 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh5O55240 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rdh5O55240 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh5O55240 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.31■□□□□ 0.68
Rdh5O55240 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh5O55240 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh5O55240 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh5O55240 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.3■□□□□ 0.68
Rdh5O55240 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh5O55240 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rdh5O55240 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.3■□□□□ 0.68
Rdh5O55240 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh5O55240 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh5O55240 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh5O55240 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh5O55240 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh5O55240 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh5O55240 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rdh5O55240 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh5O55240 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rdh5O55240 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh5O55240 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.29■□□□□ 0.68
Rdh5O55240 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh5O55240 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh5O55240 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh5O55240 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh5O55240 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh5O55240 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rdh5O55240 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.28■□□□□ 0.68
Rdh5O55240 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh5O55240 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh5O55240 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rdh5O55240 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh5O55240 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh5O55240 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh5O55240 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh5O55240 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh5O55240 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.27■□□□□ 0.68
Rdh5O55240 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rdh5O55240 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh5O55240 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Rdh5O55240 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rdh5O55240 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rdh5O55240 Gm15039-201ENSMUST00000118914 875 ntBASIC19.26■□□□□ 0.67
Rdh5O55240 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rdh5O55240 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rdh5O55240 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Rdh5O55240 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rdh5O55240 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rdh5O55240 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh5O55240 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.25■□□□□ 0.67
Rdh5O55240 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh5O55240 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh5O55240 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh5O55240 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh5O55240 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.25■□□□□ 0.67
Rdh5O55240 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rdh5O55240 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh5O55240 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh5O55240 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh5O55240 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh5O55240 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.25■□□□□ 0.67
Rdh5O55240 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh5O55240 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms