Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh12O55134 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh12O55134 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Pcdh12O55134 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.49■□□□□ 0.55
Pcdh12O55134 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh12O55134 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh12O55134 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh12O55134 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh12O55134 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh12O55134 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh12O55134 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdh12O55134 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdh12O55134 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh12O55134 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh12O55134 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh12O55134 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh12O55134 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh12O55134 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh12O55134 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh12O55134 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdh12O55134 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdh12O55134 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdh12O55134 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh12O55134 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh12O55134 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh12O55134 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh12O55134 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh12O55134 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh12O55134 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh12O55134 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Pcdh12O55134 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh12O55134 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh12O55134 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh12O55134 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh12O55134 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh12O55134 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh12O55134 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdh12O55134 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh12O55134 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.45■□□□□ 0.54
Pcdh12O55134 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh12O55134 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh12O55134 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh12O55134 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh12O55134 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh12O55134 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh12O55134 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh12O55134 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh12O55134 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh12O55134 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh12O55134 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh12O55134 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh12O55134 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh12O55134 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh12O55134 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh12O55134 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh12O55134 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh12O55134 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh12O55134 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh12O55134 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh12O55134 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdh12O55134 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh12O55134 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh12O55134 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh12O55134 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pcdh12O55134 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh12O55134 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh12O55134 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdh12O55134 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh12O55134 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh12O55134 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh12O55134 Gm22238-201ENSMUST00000175222 88 ntBASIC18.42■□□□□ 0.54
Pcdh12O55134 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh12O55134 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdh12O55134 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdh12O55134 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh12O55134 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh12O55134 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh12O55134 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh12O55134 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdh12O55134 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh12O55134 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
Pcdh12O55134 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh12O55134 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh12O55134 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh12O55134 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh12O55134 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh12O55134 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh12O55134 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh12O55134 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh12O55134 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.4■□□□□ 0.54
Pcdh12O55134 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdh12O55134 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdh12O55134 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdh12O55134 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh12O55134 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdh12O55134 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh12O55134 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh12O55134 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh12O55134 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh12O55134 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms