Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Banf1O54962 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Banf1O54962 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.82■□□□□ 0.92
Banf1O54962 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.82■□□□□ 0.92
Banf1O54962 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Banf1O54962 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Banf1O54962 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Banf1O54962 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Banf1O54962 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.82■□□□□ 0.92
Banf1O54962 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.81■□□□□ 0.92
Banf1O54962 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Banf1O54962 Golph3-202ENSMUST00000226517 2359 ntBASIC20.81■□□□□ 0.92
Banf1O54962 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Banf1O54962 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.81■□□□□ 0.92
Banf1O54962 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Banf1O54962 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Banf1O54962 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Banf1O54962 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Banf1O54962 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Banf1O54962 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Banf1O54962 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Banf1O54962 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.8■□□□□ 0.92
Banf1O54962 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Banf1O54962 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Banf1O54962 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.8■□□□□ 0.92
Banf1O54962 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Banf1O54962 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Banf1O54962 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Banf1O54962 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Banf1O54962 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Banf1O54962 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Banf1O54962 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Banf1O54962 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.79■□□□□ 0.92
Banf1O54962 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Banf1O54962 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Banf1O54962 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Banf1O54962 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.78■□□□□ 0.92
Banf1O54962 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Banf1O54962 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Banf1O54962 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.78■□□□□ 0.92
Banf1O54962 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Banf1O54962 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.78■□□□□ 0.92
Banf1O54962 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.78■□□□□ 0.92
Banf1O54962 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Banf1O54962 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Banf1O54962 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Banf1O54962 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Banf1O54962 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.77■□□□□ 0.92
Banf1O54962 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Banf1O54962 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Banf1O54962 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Banf1O54962 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Banf1O54962 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Banf1O54962 Gm13238-201ENSMUST00000117655 780 ntBASIC20.77■□□□□ 0.92
Banf1O54962 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Banf1O54962 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.77■□□□□ 0.92
Banf1O54962 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Banf1O54962 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Banf1O54962 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Banf1O54962 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Banf1O54962 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Banf1O54962 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Banf1O54962 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Banf1O54962 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Banf1O54962 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Banf1O54962 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Banf1O54962 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Banf1O54962 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Banf1O54962 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Banf1O54962 Iqck-206ENSMUST00000208658 2891 ntBASIC20.76■□□□□ 0.91
Banf1O54962 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Banf1O54962 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Banf1O54962 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
Banf1O54962 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.76■□□□□ 0.91
Banf1O54962 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Banf1O54962 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Banf1O54962 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Banf1O54962 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Banf1O54962 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Banf1O54962 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.75■□□□□ 0.91
Banf1O54962 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Banf1O54962 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.75■□□□□ 0.91
Banf1O54962 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Banf1O54962 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.75■□□□□ 0.91
Banf1O54962 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Banf1O54962 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Banf1O54962 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Banf1O54962 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Banf1O54962 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Banf1O54962 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Banf1O54962 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Banf1O54962 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Banf1O54962 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.74■□□□□ 0.91
Banf1O54962 Gm45444-201ENSMUST00000211394 898 ntBASIC20.74■□□□□ 0.91
Banf1O54962 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Banf1O54962 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.74■□□□□ 0.91
Banf1O54962 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Banf1O54962 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Banf1O54962 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Banf1O54962 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms