Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Cap2-205ENSMUST00000225824 1634 ntBASIC18.53■□□□□ 0.56
Matn3O35701 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Matn3O35701 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Matn3O35701 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Matn3O35701 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.53■□□□□ 0.56
Matn3O35701 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Matn3O35701 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Matn3O35701 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Matn3O35701 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Matn3O35701 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.52■□□□□ 0.56
Matn3O35701 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.52■□□□□ 0.55
Matn3O35701 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Matn3O35701 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Matn3O35701 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.51■□□□□ 0.55
Matn3O35701 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Matn3O35701 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Matn3O35701 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Matn3O35701 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Matn3O35701 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Matn3O35701 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Matn3O35701 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Matn3O35701 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Matn3O35701 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Matn3O35701 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.5■□□□□ 0.55
Matn3O35701 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Matn3O35701 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Matn3O35701 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.5■□□□□ 0.55
Matn3O35701 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Matn3O35701 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Matn3O35701 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Matn3O35701 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn3O35701 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Matn3O35701 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.49■□□□□ 0.55
Matn3O35701 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn3O35701 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.49■□□□□ 0.55
Matn3O35701 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Matn3O35701 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.49■□□□□ 0.55
Matn3O35701 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn3O35701 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn3O35701 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Matn3O35701 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Matn3O35701 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Matn3O35701 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Matn3O35701 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Matn3O35701 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Matn3O35701 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Matn3O35701 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.47■□□□□ 0.55
Matn3O35701 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Matn3O35701 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn3O35701 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn3O35701 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn3O35701 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Matn3O35701 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Matn3O35701 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn3O35701 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn3O35701 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn3O35701 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn3O35701 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.47■□□□□ 0.55
Matn3O35701 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Matn3O35701 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Matn3O35701 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Matn3O35701 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Matn3O35701 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Matn3O35701 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Matn3O35701 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.54
Matn3O35701 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Matn3O35701 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Matn3O35701 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.45■□□□□ 0.54
Matn3O35701 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Matn3O35701 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Matn3O35701 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.44■□□□□ 0.54
Matn3O35701 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.44■□□□□ 0.54
Matn3O35701 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Matn3O35701 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.44■□□□□ 0.54
Matn3O35701 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn3O35701 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn3O35701 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn3O35701 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn3O35701 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn3O35701 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Matn3O35701 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Matn3O35701 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Matn3O35701 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn3O35701 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn3O35701 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn3O35701 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn3O35701 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn3O35701 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms