Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trove2O08848 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trove2O08848 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trove2O08848 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trove2O08848 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trove2O08848 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.8■□□□□ 0.92
Trove2O08848 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trove2O08848 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trove2O08848 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trove2O08848 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trove2O08848 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trove2O08848 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trove2O08848 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trove2O08848 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trove2O08848 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trove2O08848 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trove2O08848 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trove2O08848 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trove2O08848 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trove2O08848 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trove2O08848 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.78■□□□□ 0.92
Trove2O08848 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trove2O08848 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trove2O08848 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trove2O08848 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trove2O08848 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trove2O08848 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.77■□□□□ 0.92
Trove2O08848 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trove2O08848 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Trove2O08848 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trove2O08848 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trove2O08848 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trove2O08848 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Trove2O08848 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trove2O08848 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trove2O08848 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Trove2O08848 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trove2O08848 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trove2O08848 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trove2O08848 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trove2O08848 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trove2O08848 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.76■□□□□ 0.91
Trove2O08848 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trove2O08848 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trove2O08848 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.76■□□□□ 0.91
Trove2O08848 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trove2O08848 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trove2O08848 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trove2O08848 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.75■□□□□ 0.91
Trove2O08848 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.75■□□□□ 0.91
Trove2O08848 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trove2O08848 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trove2O08848 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trove2O08848 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.75■□□□□ 0.91
Trove2O08848 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.75■□□□□ 0.91
Trove2O08848 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trove2O08848 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trove2O08848 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Trove2O08848 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trove2O08848 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trove2O08848 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trove2O08848 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trove2O08848 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trove2O08848 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trove2O08848 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.74■□□□□ 0.91
Trove2O08848 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trove2O08848 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.74■□□□□ 0.91
Trove2O08848 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trove2O08848 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trove2O08848 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trove2O08848 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.73■□□□□ 0.91
Trove2O08848 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trove2O08848 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trove2O08848 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.73■□□□□ 0.91
Trove2O08848 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trove2O08848 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trove2O08848 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trove2O08848 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trove2O08848 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trove2O08848 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trove2O08848 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trove2O08848 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trove2O08848 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trove2O08848 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trove2O08848 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trove2O08848 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trove2O08848 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trove2O08848 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Trove2O08848 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trove2O08848 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trove2O08848 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trove2O08848 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trove2O08848 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Trove2O08848 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trove2O08848 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trove2O08848 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trove2O08848 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trove2O08848 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trove2O08848 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trove2O08848 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms