Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Tnfrsf11bO08712 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf11bO08712 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf11bO08712 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf11bO08712 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.8■□□□□ 0.92
Tnfrsf11bO08712 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.8■□□□□ 0.92
Tnfrsf11bO08712 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.8■□□□□ 0.92
Tnfrsf11bO08712 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf11bO08712 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.8■□□□□ 0.92
Tnfrsf11bO08712 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.8■□□□□ 0.92
Tnfrsf11bO08712 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Tnfrsf11bO08712 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf11bO08712 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf11bO08712 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Tnfrsf11bO08712 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf11bO08712 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.79■□□□□ 0.92
Tnfrsf11bO08712 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11bO08712 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tnfrsf11bO08712 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11bO08712 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11bO08712 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tnfrsf11bO08712 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Tnfrsf11bO08712 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.77■□□□□ 0.92
Tnfrsf11bO08712 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf11bO08712 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf11bO08712 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf11bO08712 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf11bO08712 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.77■□□□□ 0.92
Tnfrsf11bO08712 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf11bO08712 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Tnfrsf11bO08712 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Tnfrsf11bO08712 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf11bO08712 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfrsf11bO08712 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfrsf11bO08712 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfrsf11bO08712 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf11bO08712 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf11bO08712 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.76■□□□□ 0.91
Tnfrsf11bO08712 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.76■□□□□ 0.91
Tnfrsf11bO08712 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf11bO08712 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf11bO08712 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tnfrsf11bO08712 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf11bO08712 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf11bO08712 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf11bO08712 Gm10399-202ENSMUST00000202768 748 ntBASIC20.75■□□□□ 0.91
Tnfrsf11bO08712 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf11bO08712 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tnfrsf11bO08712 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11bO08712 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tnfrsf11bO08712 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11bO08712 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11bO08712 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11bO08712 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tnfrsf11bO08712 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11bO08712 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11bO08712 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11bO08712 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11bO08712 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11bO08712 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11bO08712 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11bO08712 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11bO08712 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11bO08712 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11bO08712 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11bO08712 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.72■□□□□ 0.91
Tnfrsf11bO08712 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.72■□□□□ 0.91
Tnfrsf11bO08712 Gm10232-201ENSMUST00000089221 720 ntBASIC20.72■□□□□ 0.91
Tnfrsf11bO08712 Notumos-201ENSMUST00000151998 2659 ntBASIC20.72■□□□□ 0.91
Tnfrsf11bO08712 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11bO08712 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11bO08712 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11bO08712 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf11bO08712 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf11bO08712 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf11bO08712 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf11bO08712 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf11bO08712 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tnfrsf11bO08712 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11bO08712 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11bO08712 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Tnfrsf11bO08712 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11bO08712 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tnfrsf11bO08712 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11bO08712 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Tnfrsf11bO08712 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11bO08712 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11bO08712 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms