Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rfpl4bJ3QPR6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.66■■□□□ 1.38
Rfpl4bJ3QPR6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Rfpl4bJ3QPR6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rfpl4bJ3QPR6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rfpl4bJ3QPR6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Rfpl4bJ3QPR6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rfpl4bJ3QPR6 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.65■■□□□ 1.38
Rfpl4bJ3QPR6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rfpl4bJ3QPR6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rfpl4bJ3QPR6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.65■■□□□ 1.38
Rfpl4bJ3QPR6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rfpl4bJ3QPR6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rfpl4bJ3QPR6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rfpl4bJ3QPR6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.64■■□□□ 1.38
Rfpl4bJ3QPR6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.64■■□□□ 1.38
Rfpl4bJ3QPR6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rfpl4bJ3QPR6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rfpl4bJ3QPR6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rfpl4bJ3QPR6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rfpl4bJ3QPR6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.63■■□□□ 1.37
Rfpl4bJ3QPR6 Gm10493-201ENSMUST00000097270 612 ntBASIC23.63■■□□□ 1.37
Rfpl4bJ3QPR6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rfpl4bJ3QPR6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rfpl4bJ3QPR6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfpl4bJ3QPR6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.62■■□□□ 1.37
Rfpl4bJ3QPR6 Gm43060-201ENSMUST00000200621 289 ntBASIC23.62■■□□□ 1.37
Rfpl4bJ3QPR6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.62■■□□□ 1.37
Rfpl4bJ3QPR6 Spcs1-204ENSMUST00000226782 949 ntBASIC23.62■■□□□ 1.37
Rfpl4bJ3QPR6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfpl4bJ3QPR6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfpl4bJ3QPR6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rfpl4bJ3QPR6 Gm26571-201ENSMUST00000181399 666 ntBASIC23.6■■□□□ 1.37
Rfpl4bJ3QPR6 Gm42569-201ENSMUST00000200539 472 ntBASIC23.6■■□□□ 1.37
Rfpl4bJ3QPR6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Rfpl4bJ3QPR6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 Gm27405-201ENSMUST00000184201 112 ntBASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.59■■□□□ 1.37
Rfpl4bJ3QPR6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfpl4bJ3QPR6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.37
Rfpl4bJ3QPR6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfpl4bJ3QPR6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.58■■□□□ 1.36
Rfpl4bJ3QPR6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.57■■□□□ 1.36
Rfpl4bJ3QPR6 Gm43530-201ENSMUST00000195920 274 ntBASIC23.57■■□□□ 1.36
Rfpl4bJ3QPR6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rfpl4bJ3QPR6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rfpl4bJ3QPR6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rfpl4bJ3QPR6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Rfpl4bJ3QPR6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.56■■□□□ 1.36
Rfpl4bJ3QPR6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.56■■□□□ 1.36
Rfpl4bJ3QPR6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Rfpl4bJ3QPR6 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.56■■□□□ 1.36
Rfpl4bJ3QPR6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rfpl4bJ3QPR6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rfpl4bJ3QPR6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rfpl4bJ3QPR6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rfpl4bJ3QPR6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rfpl4bJ3QPR6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rfpl4bJ3QPR6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rfpl4bJ3QPR6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rfpl4bJ3QPR6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Rfpl4bJ3QPR6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rfpl4bJ3QPR6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rfpl4bJ3QPR6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rfpl4bJ3QPR6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rfpl4bJ3QPR6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 Gm42642-201ENSMUST00000200683 355 ntBASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rfpl4bJ3QPR6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms