Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm20708H3BKF4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm20708H3BKF4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm20708H3BKF4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm20708H3BKF4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm20708H3BKF4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Gm20708H3BKF4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm20708H3BKF4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm20708H3BKF4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm20708H3BKF4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm20708H3BKF4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm20708H3BKF4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm20708H3BKF4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm20708H3BKF4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Gm20708H3BKF4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm20708H3BKF4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm20708H3BKF4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm20708H3BKF4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm20708H3BKF4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm20708H3BKF4 Gm9870-201ENSMUST00000063874 645 ntBASIC17.21■□□□□ 0.35
Gm20708H3BKF4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm20708H3BKF4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm20708H3BKF4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.19■□□□□ 0.34
Gm20708H3BKF4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm20708H3BKF4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm20708H3BKF4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm20708H3BKF4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm20708H3BKF4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm20708H3BKF4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm20708H3BKF4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.19■□□□□ 0.34
Gm20708H3BKF4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm20708H3BKF4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm20708H3BKF4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm20708H3BKF4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm20708H3BKF4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm20708H3BKF4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm20708H3BKF4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Gm20708H3BKF4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm20708H3BKF4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Gm20708H3BKF4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm20708H3BKF4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm20708H3BKF4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm20708H3BKF4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm20708H3BKF4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm20708H3BKF4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm20708H3BKF4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm20708H3BKF4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm20708H3BKF4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm20708H3BKF4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm20708H3BKF4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm20708H3BKF4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm20708H3BKF4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm20708H3BKF4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm20708H3BKF4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm20708H3BKF4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm20708H3BKF4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm20708H3BKF4 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.15■□□□□ 0.34
Gm20708H3BKF4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
Gm20708H3BKF4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm20708H3BKF4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm20708H3BKF4 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms