Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col6a3E9PWQ3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.07■□□□□ 0.96
Col6a3E9PWQ3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col6a3E9PWQ3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col6a3E9PWQ3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.07■□□□□ 0.96
Col6a3E9PWQ3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col6a3E9PWQ3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col6a3E9PWQ3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Col6a3E9PWQ3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col6a3E9PWQ3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.07■□□□□ 0.96
Col6a3E9PWQ3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col6a3E9PWQ3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.06■□□□□ 0.96
Col6a3E9PWQ3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col6a3E9PWQ3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col6a3E9PWQ3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col6a3E9PWQ3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col6a3E9PWQ3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col6a3E9PWQ3 Gm15565-201ENSMUST00000118890 427 ntBASIC21.05■□□□□ 0.96
Col6a3E9PWQ3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.05■□□□□ 0.96
Col6a3E9PWQ3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col6a3E9PWQ3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col6a3E9PWQ3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col6a3E9PWQ3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col6a3E9PWQ3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col6a3E9PWQ3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col6a3E9PWQ3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col6a3E9PWQ3 Reep4-203ENSMUST00000226563 1444 ntBASIC21.04■□□□□ 0.96
Col6a3E9PWQ3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col6a3E9PWQ3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col6a3E9PWQ3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col6a3E9PWQ3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col6a3E9PWQ3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.03■□□□□ 0.96
Col6a3E9PWQ3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.03■□□□□ 0.96
Col6a3E9PWQ3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col6a3E9PWQ3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col6a3E9PWQ3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col6a3E9PWQ3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col6a3E9PWQ3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col6a3E9PWQ3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Col6a3E9PWQ3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col6a3E9PWQ3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.02■□□□□ 0.96
Col6a3E9PWQ3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Col6a3E9PWQ3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col6a3E9PWQ3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col6a3E9PWQ3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Col6a3E9PWQ3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.02■□□□□ 0.95
Col6a3E9PWQ3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col6a3E9PWQ3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col6a3E9PWQ3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Col6a3E9PWQ3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Col6a3E9PWQ3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col6a3E9PWQ3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col6a3E9PWQ3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Col6a3E9PWQ3 Gm4430-201ENSMUST00000192413 1943 ntBASIC21■□□□□ 0.95
Col6a3E9PWQ3 Gm715-201ENSMUST00000117865 831 ntBASIC21■□□□□ 0.95
Col6a3E9PWQ3 Gm13234-201ENSMUST00000120010 747 ntBASIC21■□□□□ 0.95
Col6a3E9PWQ3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col6a3E9PWQ3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col6a3E9PWQ3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col6a3E9PWQ3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col6a3E9PWQ3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col6a3E9PWQ3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col6a3E9PWQ3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col6a3E9PWQ3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col6a3E9PWQ3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col6a3E9PWQ3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Col6a3E9PWQ3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col6a3E9PWQ3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col6a3E9PWQ3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col6a3E9PWQ3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col6a3E9PWQ3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.97■□□□□ 0.95
Col6a3E9PWQ3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Col6a3E9PWQ3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col6a3E9PWQ3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col6a3E9PWQ3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.96■□□□□ 0.95
Col6a3E9PWQ3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.96■□□□□ 0.95
Col6a3E9PWQ3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.96■□□□□ 0.95
Col6a3E9PWQ3 Gm7514-201ENSMUST00000209475 934 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms