Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Gcn1E9PVA8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gcn1E9PVA8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gcn1E9PVA8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gcn1E9PVA8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.78■□□□□ 0.44
Gcn1E9PVA8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gcn1E9PVA8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gcn1E9PVA8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gcn1E9PVA8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Gcn1E9PVA8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gcn1E9PVA8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gcn1E9PVA8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gcn1E9PVA8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gcn1E9PVA8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gcn1E9PVA8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gcn1E9PVA8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gcn1E9PVA8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gcn1E9PVA8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Gcn1E9PVA8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gcn1E9PVA8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gcn1E9PVA8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.76■□□□□ 0.43
Gcn1E9PVA8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.76■□□□□ 0.43
Gcn1E9PVA8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gcn1E9PVA8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.76■□□□□ 0.43
Gcn1E9PVA8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gcn1E9PVA8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gcn1E9PVA8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gcn1E9PVA8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gcn1E9PVA8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.75■□□□□ 0.43
Gcn1E9PVA8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 Gm13234-201ENSMUST00000120010 747 ntBASIC17.75■□□□□ 0.43
Gcn1E9PVA8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gcn1E9PVA8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gcn1E9PVA8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gcn1E9PVA8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.74■□□□□ 0.43
Gcn1E9PVA8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gcn1E9PVA8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gcn1E9PVA8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.74■□□□□ 0.43
Gcn1E9PVA8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gcn1E9PVA8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.73■□□□□ 0.43
Gcn1E9PVA8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Gcn1E9PVA8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gcn1E9PVA8 Gm5408-201ENSMUST00000197998 747 ntBASIC17.73■□□□□ 0.43
Gcn1E9PVA8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gcn1E9PVA8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gcn1E9PVA8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.73■□□□□ 0.43
Gcn1E9PVA8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gcn1E9PVA8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gcn1E9PVA8 Gm7367-201ENSMUST00000057611 492 ntBASIC17.72■□□□□ 0.43
Gcn1E9PVA8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.72■□□□□ 0.43
Gcn1E9PVA8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Gcn1E9PVA8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gcn1E9PVA8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gcn1E9PVA8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gcn1E9PVA8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gcn1E9PVA8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gcn1E9PVA8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.71■□□□□ 0.43
Gcn1E9PVA8 Gm7514-201ENSMUST00000209475 934 ntBASIC17.71■□□□□ 0.43
Gcn1E9PVA8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.71■□□□□ 0.43
Gcn1E9PVA8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gcn1E9PVA8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gcn1E9PVA8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gcn1E9PVA8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gcn1E9PVA8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gcn1E9PVA8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Gcn1E9PVA8 Gm6576-201ENSMUST00000169678 883 ntBASIC17.7■□□□□ 0.42
Gcn1E9PVA8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gcn1E9PVA8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gcn1E9PVA8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.7■□□□□ 0.42
Gcn1E9PVA8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.7■□□□□ 0.42
Gcn1E9PVA8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gcn1E9PVA8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gcn1E9PVA8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gcn1E9PVA8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gcn1E9PVA8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.7■□□□□ 0.42
Gcn1E9PVA8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gcn1E9PVA8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gcn1E9PVA8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gcn1E9PVA8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms