Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptchd4B9EKX1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Ptchd4B9EKX1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptchd4B9EKX1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ptchd4B9EKX1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptchd4B9EKX1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ptchd4B9EKX1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptchd4B9EKX1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptchd4B9EKX1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptchd4B9EKX1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptchd4B9EKX1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ptchd4B9EKX1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ptchd4B9EKX1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptchd4B9EKX1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 Gm6085-201ENSMUST00000182774 1470 ntBASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC22.11■■□□□ 1.13
Ptchd4B9EKX1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Spcs1-204ENSMUST00000226782 949 ntBASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptchd4B9EKX1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptchd4B9EKX1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ptchd4B9EKX1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptchd4B9EKX1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.09■■□□□ 1.13
Ptchd4B9EKX1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptchd4B9EKX1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Ptchd4B9EKX1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptchd4B9EKX1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.09■■□□□ 1.13
Ptchd4B9EKX1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptchd4B9EKX1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ptchd4B9EKX1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ptchd4B9EKX1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC22.08■■□□□ 1.13
Ptchd4B9EKX1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ptchd4B9EKX1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ptchd4B9EKX1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.08■■□□□ 1.13
Ptchd4B9EKX1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.12
Ptchd4B9EKX1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptchd4B9EKX1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ptchd4B9EKX1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptchd4B9EKX1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptchd4B9EKX1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptchd4B9EKX1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.07■■□□□ 1.12
Ptchd4B9EKX1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ptchd4B9EKX1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptchd4B9EKX1 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.07■■□□□ 1.12
Ptchd4B9EKX1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptchd4B9EKX1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.06■■□□□ 1.12
Ptchd4B9EKX1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptchd4B9EKX1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ptchd4B9EKX1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptchd4B9EKX1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ptchd4B9EKX1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ptchd4B9EKX1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ptchd4B9EKX1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptchd4B9EKX1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptchd4B9EKX1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ptchd4B9EKX1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.05■■□□□ 1.12
Ptchd4B9EKX1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ptchd4B9EKX1 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.04■■□□□ 1.12
Ptchd4B9EKX1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptchd4B9EKX1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptchd4B9EKX1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ptchd4B9EKX1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ptchd4B9EKX1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
Ptchd4B9EKX1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ptchd4B9EKX1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
Ptchd4B9EKX1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptchd4B9EKX1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptchd4B9EKX1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptchd4B9EKX1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptchd4B9EKX1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Ptchd4B9EKX1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.02■■□□□ 1.12
Ptchd4B9EKX1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ptchd4B9EKX1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ptchd4B9EKX1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptchd4B9EKX1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.01■■□□□ 1.11
Ptchd4B9EKX1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.01■■□□□ 1.11
Ptchd4B9EKX1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.01■■□□□ 1.11
Ptchd4B9EKX1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC22.01■■□□□ 1.11
Ptchd4B9EKX1 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms