Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col4a6B1AVK5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col4a6B1AVK5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col4a6B1AVK5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col4a6B1AVK5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Col4a6B1AVK5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Col4a6B1AVK5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a6B1AVK5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a6B1AVK5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a6B1AVK5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a6B1AVK5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.55■■□□□ 1.04
Col4a6B1AVK5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a6B1AVK5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a6B1AVK5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a6B1AVK5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a6B1AVK5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a6B1AVK5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a6B1AVK5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Col4a6B1AVK5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.54■■□□□ 1.04
Col4a6B1AVK5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a6B1AVK5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a6B1AVK5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a6B1AVK5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.53■■□□□ 1.04
Col4a6B1AVK5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a6B1AVK5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a6B1AVK5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a6B1AVK5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a6B1AVK5 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.53■■□□□ 1.04
Col4a6B1AVK5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.53■■□□□ 1.04
Col4a6B1AVK5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Col4a6B1AVK5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a6B1AVK5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.53■■□□□ 1.04
Col4a6B1AVK5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a6B1AVK5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.52■■□□□ 1.04
Col4a6B1AVK5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a6B1AVK5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.52■■□□□ 1.04
Col4a6B1AVK5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a6B1AVK5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Col4a6B1AVK5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a6B1AVK5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Col4a6B1AVK5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Col4a6B1AVK5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Col4a6B1AVK5 Gm27011-201ENSMUST00000182352 972 ntBASIC21.51■■□□□ 1.03
Col4a6B1AVK5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Col4a6B1AVK5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a6B1AVK5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Gm42642-201ENSMUST00000200683 355 ntBASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.5■■□□□ 1.03
Col4a6B1AVK5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a6B1AVK5 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.49■■□□□ 1.03
Col4a6B1AVK5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a6B1AVK5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a6B1AVK5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a6B1AVK5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a6B1AVK5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a6B1AVK5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a6B1AVK5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.48■■□□□ 1.03
Col4a6B1AVK5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a6B1AVK5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a6B1AVK5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a6B1AVK5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a6B1AVK5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a6B1AVK5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a6B1AVK5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a6B1AVK5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Col4a6B1AVK5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a6B1AVK5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a6B1AVK5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a6B1AVK5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Col4a6B1AVK5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a6B1AVK5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a6B1AVK5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col4a6B1AVK5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms