Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd6A3KFM7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd6A3KFM7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.99■□□□□ 0.31
Chd6A3KFM7 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.99■□□□□ 0.31
Chd6A3KFM7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd6A3KFM7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chd6A3KFM7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd6A3KFM7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd6A3KFM7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Chd6A3KFM7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chd6A3KFM7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd6A3KFM7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Chd6A3KFM7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.98■□□□□ 0.31
Chd6A3KFM7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chd6A3KFM7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd6A3KFM7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd6A3KFM7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chd6A3KFM7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chd6A3KFM7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.97■□□□□ 0.31
Chd6A3KFM7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd6A3KFM7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chd6A3KFM7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd6A3KFM7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd6A3KFM7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd6A3KFM7 Gm715-201ENSMUST00000117865 831 ntBASIC16.96■□□□□ 0.3
Chd6A3KFM7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chd6A3KFM7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd6A3KFM7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd6A3KFM7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd6A3KFM7 Gm18101-201ENSMUST00000215769 548 ntBASIC16.95■□□□□ 0.3
Chd6A3KFM7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Chd6A3KFM7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd6A3KFM7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd6A3KFM7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Chd6A3KFM7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.95■□□□□ 0.3
Chd6A3KFM7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.95■□□□□ 0.3
Chd6A3KFM7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd6A3KFM7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.95■□□□□ 0.3
Chd6A3KFM7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd6A3KFM7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd6A3KFM7 Gm15565-201ENSMUST00000118890 427 ntBASIC16.94■□□□□ 0.3
Chd6A3KFM7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd6A3KFM7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chd6A3KFM7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd6A3KFM7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd6A3KFM7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd6A3KFM7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd6A3KFM7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd6A3KFM7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.94■□□□□ 0.3
Chd6A3KFM7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd6A3KFM7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.94■□□□□ 0.3
Chd6A3KFM7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd6A3KFM7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Chd6A3KFM7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd6A3KFM7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd6A3KFM7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd6A3KFM7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Chd6A3KFM7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.92■□□□□ 0.3
Chd6A3KFM7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd6A3KFM7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.92■□□□□ 0.3
Chd6A3KFM7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd6A3KFM7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.92■□□□□ 0.3
Chd6A3KFM7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd6A3KFM7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.92■□□□□ 0.3
Chd6A3KFM7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd6A3KFM7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd6A3KFM7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd6A3KFM7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Chd6A3KFM7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd6A3KFM7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd6A3KFM7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Chd6A3KFM7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Chd6A3KFM7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd6A3KFM7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd6A3KFM7 Gm27741-201ENSMUST00000185060 237 ntBASIC16.9■□□□□ 0.3
Chd6A3KFM7 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.9■□□□□ 0.3
Chd6A3KFM7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms