Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcna-ps2A0A140T8V5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcna-ps2A0A140T8V5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcna-ps2A0A140T8V5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcna-ps2A0A140T8V5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcna-ps2A0A140T8V5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcna-ps2A0A140T8V5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcna-ps2A0A140T8V5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcna-ps2A0A140T8V5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcna-ps2A0A140T8V5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcna-ps2A0A140T8V5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcna-ps2A0A140T8V5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Pcna-ps2A0A140T8V5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pcna-ps2A0A140T8V5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcna-ps2A0A140T8V5 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.41■□□□□ 0.86
Pcna-ps2A0A140T8V5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.41■□□□□ 0.86
Pcna-ps2A0A140T8V5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.41■□□□□ 0.86
Pcna-ps2A0A140T8V5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Pcna-ps2A0A140T8V5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcna-ps2A0A140T8V5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcna-ps2A0A140T8V5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcna-ps2A0A140T8V5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcna-ps2A0A140T8V5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pcna-ps2A0A140T8V5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcna-ps2A0A140T8V5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcna-ps2A0A140T8V5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcna-ps2A0A140T8V5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcna-ps2A0A140T8V5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcna-ps2A0A140T8V5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcna-ps2A0A140T8V5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcna-ps2A0A140T8V5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcna-ps2A0A140T8V5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Pcna-ps2A0A140T8V5 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.39■□□□□ 0.85
Pcna-ps2A0A140T8V5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Pcna-ps2A0A140T8V5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcna-ps2A0A140T8V5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcna-ps2A0A140T8V5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcna-ps2A0A140T8V5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcna-ps2A0A140T8V5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcna-ps2A0A140T8V5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcna-ps2A0A140T8V5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcna-ps2A0A140T8V5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcna-ps2A0A140T8V5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcna-ps2A0A140T8V5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcna-ps2A0A140T8V5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcna-ps2A0A140T8V5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcna-ps2A0A140T8V5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcna-ps2A0A140T8V5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pcna-ps2A0A140T8V5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Gm10399-202ENSMUST00000202768 748 ntBASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcna-ps2A0A140T8V5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcna-ps2A0A140T8V5 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.35■□□□□ 0.85
Pcna-ps2A0A140T8V5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcna-ps2A0A140T8V5 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.35■□□□□ 0.85
Pcna-ps2A0A140T8V5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcna-ps2A0A140T8V5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcna-ps2A0A140T8V5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcna-ps2A0A140T8V5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcna-ps2A0A140T8V5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcna-ps2A0A140T8V5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcna-ps2A0A140T8V5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcna-ps2A0A140T8V5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms