Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-2A0A140T8N6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-2A0A140T8N6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-2A0A140T8N6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-2A0A140T8N6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.21□□□□□ -0.13
Trbv13-2A0A140T8N6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.21□□□□□ -0.13
Trbv13-2A0A140T8N6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.21□□□□□ -0.13
Trbv13-2A0A140T8N6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-2A0A140T8N6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-2A0A140T8N6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trbv13-2A0A140T8N6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 Etf1-202ENSMUST00000180351 108 ntBASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 Gm7417-201ENSMUST00000192950 473 ntBASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv13-2A0A140T8N6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trbv13-2A0A140T8N6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-2A0A140T8N6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trbv13-2A0A140T8N6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv13-2A0A140T8N6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-2A0A140T8N6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-2A0A140T8N6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-2A0A140T8N6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-2A0A140T8N6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.18□□□□□ -0.14
Trbv13-2A0A140T8N6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-2A0A140T8N6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trbv13-2A0A140T8N6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-2A0A140T8N6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-2A0A140T8N6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv13-2A0A140T8N6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-2A0A140T8N6 Gm9959-201ENSMUST00000068277 390 ntBASIC14.17□□□□□ -0.14
Trbv13-2A0A140T8N6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-2A0A140T8N6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-2A0A140T8N6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-2A0A140T8N6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.16□□□□□ -0.14
Trbv13-2A0A140T8N6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-2A0A140T8N6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.16□□□□□ -0.14
Trbv13-2A0A140T8N6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-2A0A140T8N6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-2A0A140T8N6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.16□□□□□ -0.14
Trbv13-2A0A140T8N6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-2A0A140T8N6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-2A0A140T8N6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv13-2A0A140T8N6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-2A0A140T8N6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv13-2A0A140T8N6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-2A0A140T8N6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-2A0A140T8N6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-2A0A140T8N6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-2A0A140T8N6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-2A0A140T8N6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-2A0A140T8N6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trbv13-2A0A140T8N6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-2A0A140T8N6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv13-2A0A140T8N6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-2A0A140T8N6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-2A0A140T8N6 Rps24-207ENSMUST00000224568 714 ntBASIC14.13□□□□□ -0.15
Trbv13-2A0A140T8N6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.13□□□□□ -0.15
Trbv13-2A0A140T8N6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-2A0A140T8N6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-2A0A140T8N6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-2A0A140T8N6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trbv13-2A0A140T8N6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-2A0A140T8N6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.12□□□□□ -0.15
Trbv13-2A0A140T8N6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-2A0A140T8N6 Notumos-201ENSMUST00000151998 2659 ntBASIC14.12□□□□□ -0.15
Trbv13-2A0A140T8N6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-2A0A140T8N6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms