Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
Cfap99A0A140LIX9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC24.39■■□□□ 1.49
Cfap99A0A140LIX9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cfap99A0A140LIX9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cfap99A0A140LIX9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cfap99A0A140LIX9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cfap99A0A140LIX9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Cfap99A0A140LIX9 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.38■■□□□ 1.49
Cfap99A0A140LIX9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cfap99A0A140LIX9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cfap99A0A140LIX9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cfap99A0A140LIX9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cfap99A0A140LIX9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cfap99A0A140LIX9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cfap99A0A140LIX9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cfap99A0A140LIX9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Cfap99A0A140LIX9 Gm8495-201ENSMUST00000188740 694 ntBASIC24.37■■□□□ 1.49
Cfap99A0A140LIX9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cfap99A0A140LIX9 Gm9870-201ENSMUST00000063874 645 ntBASIC24.37■■□□□ 1.49
Cfap99A0A140LIX9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Cfap99A0A140LIX9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Cfap99A0A140LIX9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cfap99A0A140LIX9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cfap99A0A140LIX9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cfap99A0A140LIX9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cfap99A0A140LIX9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.36■■□□□ 1.49
Cfap99A0A140LIX9 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.36■■□□□ 1.49
Cfap99A0A140LIX9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cfap99A0A140LIX9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cfap99A0A140LIX9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cfap99A0A140LIX9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cfap99A0A140LIX9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cfap99A0A140LIX9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cfap99A0A140LIX9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cfap99A0A140LIX9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cfap99A0A140LIX9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cfap99A0A140LIX9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.35■■□□□ 1.49
Cfap99A0A140LIX9 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.35■■□□□ 1.49
Cfap99A0A140LIX9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cfap99A0A140LIX9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cfap99A0A140LIX9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Cfap99A0A140LIX9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
Cfap99A0A140LIX9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Cfap99A0A140LIX9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cfap99A0A140LIX9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
Cfap99A0A140LIX9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cfap99A0A140LIX9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cfap99A0A140LIX9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cfap99A0A140LIX9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.34■■□□□ 1.49
Cfap99A0A140LIX9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cfap99A0A140LIX9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cfap99A0A140LIX9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.33■■□□□ 1.49
Cfap99A0A140LIX9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Cfap99A0A140LIX9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cfap99A0A140LIX9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Cfap99A0A140LIX9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cfap99A0A140LIX9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Cfap99A0A140LIX9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cfap99A0A140LIX9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC24.33■■□□□ 1.49
Cfap99A0A140LIX9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Cfap99A0A140LIX9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Cfap99A0A140LIX9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.33■■□□□ 1.48
Cfap99A0A140LIX9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cfap99A0A140LIX9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cfap99A0A140LIX9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Cfap99A0A140LIX9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC24.32■■□□□ 1.48
Cfap99A0A140LIX9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Cfap99A0A140LIX9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cfap99A0A140LIX9 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Gm18284-201ENSMUST00000172604 624 ntBASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cfap99A0A140LIX9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cfap99A0A140LIX9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cfap99A0A140LIX9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
Cfap99A0A140LIX9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Cfap99A0A140LIX9 Gm6139-201ENSMUST00000079261 882 ntBASIC24.3■■□□□ 1.48
Cfap99A0A140LIX9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cfap99A0A140LIX9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cfap99A0A140LIX9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.29■■□□□ 1.48
Cfap99A0A140LIX9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Cfap99A0A140LIX9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cfap99A0A140LIX9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cfap99A0A140LIX9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cfap99A0A140LIX9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cfap99A0A140LIX9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC24.28■■□□□ 1.48
Cfap99A0A140LIX9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cfap99A0A140LIX9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cfap99A0A140LIX9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms