Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC44.15■■■■■ 4.66
Gm35339A0A140LHH9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC44.15■■■■■ 4.66
Gm35339A0A140LHH9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC44.15■■■■■ 4.66
Gm35339A0A140LHH9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC44.15■■■■■ 4.66
Gm35339A0A140LHH9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC44.14■■■■■ 4.66
Gm35339A0A140LHH9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC44.14■■■■■ 4.66
Gm35339A0A140LHH9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC44.14■■■■■ 4.66
Gm35339A0A140LHH9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC44.14■■■■■ 4.66
Gm35339A0A140LHH9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC44.13■■■■■ 4.65
Gm35339A0A140LHH9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC44.13■■■■■ 4.65
Gm35339A0A140LHH9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC44.12■■■■■ 4.65
Gm35339A0A140LHH9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC44.1■■■■■ 4.65
Gm35339A0A140LHH9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC44.1■■■■■ 4.65
Gm35339A0A140LHH9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC44.1■■■■■ 4.65
Gm35339A0A140LHH9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC44.1■■■■■ 4.65
Gm35339A0A140LHH9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC44.1■■■■■ 4.65
Gm35339A0A140LHH9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC44.1■■■■■ 4.65
Gm35339A0A140LHH9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC44.1■■■■■ 4.65
Gm35339A0A140LHH9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC44.1■■■■■ 4.65
Gm35339A0A140LHH9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC44.1■■■■■ 4.65
Gm35339A0A140LHH9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC44.09■■■■■ 4.65
Gm35339A0A140LHH9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC44.09■■■■■ 4.65
Gm35339A0A140LHH9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC44.09■■■■■ 4.65
Gm35339A0A140LHH9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC44.08■■■■■ 4.65
Gm35339A0A140LHH9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC44.08■■■■■ 4.65
Gm35339A0A140LHH9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC44.08■■■■■ 4.65
Gm35339A0A140LHH9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC44.07■■■■■ 4.65
Gm35339A0A140LHH9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC44.07■■■■■ 4.65
Gm35339A0A140LHH9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC44.07■■■■■ 4.65
Gm35339A0A140LHH9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC44.07■■■■■ 4.65
Gm35339A0A140LHH9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC44.07■■■■■ 4.65
Gm35339A0A140LHH9 Gm14281-201ENSMUST00000121700 1294 ntBASIC44.06■■■■■ 4.64
Gm35339A0A140LHH9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC44.06■■■■■ 4.64
Gm35339A0A140LHH9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC44.06■■■■■ 4.64
Gm35339A0A140LHH9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC44.06■■■■■ 4.64
Gm35339A0A140LHH9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC44.05■■■■■ 4.64
Gm35339A0A140LHH9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC44.05■■■■■ 4.64
Gm35339A0A140LHH9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC44.04■■■■■ 4.64
Gm35339A0A140LHH9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC44.04■■■■■ 4.64
Gm35339A0A140LHH9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC44.04■■■■■ 4.64
Gm35339A0A140LHH9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC44.04■■■■■ 4.64
Gm35339A0A140LHH9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC44.04■■■■■ 4.64
Gm35339A0A140LHH9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC44.03■■■■■ 4.64
Gm35339A0A140LHH9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC44.03■■■■■ 4.64
Gm35339A0A140LHH9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC44.03■■■■■ 4.64
Gm35339A0A140LHH9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC44.03■■■■■ 4.64
Gm35339A0A140LHH9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC44.03■■■■■ 4.64
Gm35339A0A140LHH9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC44.02■■■■■ 4.64
Gm35339A0A140LHH9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC44.02■■■■■ 4.64
Gm35339A0A140LHH9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC44.02■■■■■ 4.64
Gm35339A0A140LHH9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC44.02■■■■■ 4.64
Gm35339A0A140LHH9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC44.01■■■■■ 4.64
Gm35339A0A140LHH9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC44.01■■■■■ 4.64
Gm35339A0A140LHH9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC44.01■■■■■ 4.64
Gm35339A0A140LHH9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC44.01■■■■■ 4.64
Gm35339A0A140LHH9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC44.01■■■■■ 4.64
Gm35339A0A140LHH9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC44■■■■■ 4.63
Gm35339A0A140LHH9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC44■■■■■ 4.63
Gm35339A0A140LHH9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC44■■■■■ 4.63
Gm35339A0A140LHH9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC44■■■■■ 4.63
Gm35339A0A140LHH9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC44■■■■■ 4.63
Gm35339A0A140LHH9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC44■■■■■ 4.63
Gm35339A0A140LHH9 Nespas-201ENSMUST00000143738 1083 ntBASIC43.99■■■■■ 4.63
Gm35339A0A140LHH9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC43.99■■■■■ 4.63
Gm35339A0A140LHH9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC43.99■■■■■ 4.63
Gm35339A0A140LHH9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC43.99■■■■■ 4.63
Gm35339A0A140LHH9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC43.99■■■■■ 4.63
Gm35339A0A140LHH9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC43.98■■■■■ 4.63
Gm35339A0A140LHH9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC43.98■■■■■ 4.63
Gm35339A0A140LHH9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC43.98■■■■■ 4.63
Gm35339A0A140LHH9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC43.98■■■■■ 4.63
Gm35339A0A140LHH9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC43.98■■■■■ 4.63
Gm35339A0A140LHH9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC43.98■■■■■ 4.63
Gm35339A0A140LHH9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC43.98■■■■■ 4.63
Gm35339A0A140LHH9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC43.98■■■■■ 4.63
Gm35339A0A140LHH9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC43.98■■■■■ 4.63
Gm35339A0A140LHH9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC43.98■■■■■ 4.63
Gm35339A0A140LHH9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC43.97■■■■■ 4.63
Gm35339A0A140LHH9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC43.97■■■■■ 4.63
Gm35339A0A140LHH9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC43.97■■■■■ 4.63
Gm35339A0A140LHH9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC43.97■■■■■ 4.63
Gm35339A0A140LHH9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC43.97■■■■■ 4.63
Gm35339A0A140LHH9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC43.97■■■■■ 4.63
Gm35339A0A140LHH9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC43.97■■■■■ 4.63
Gm35339A0A140LHH9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC43.97■■■■■ 4.63
Gm35339A0A140LHH9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC43.96■■■■■ 4.63
Gm35339A0A140LHH9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC43.96■■■■■ 4.63
Gm35339A0A140LHH9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC43.96■■■■■ 4.63
Gm35339A0A140LHH9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC43.96■■■■■ 4.63
Gm35339A0A140LHH9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC43.95■■■■■ 4.63
Gm35339A0A140LHH9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC43.95■■■■■ 4.63
Gm35339A0A140LHH9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC43.95■■■■■ 4.63
Gm35339A0A140LHH9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC43.94■■■■■ 4.63
Gm35339A0A140LHH9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC43.94■■■■■ 4.63
Gm35339A0A140LHH9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC43.94■■■■■ 4.62
Gm35339A0A140LHH9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC43.94■■■■■ 4.62
Gm35339A0A140LHH9 Gm10653-202ENSMUST00000139570 835 ntBASIC43.93■■■■■ 4.62
Gm35339A0A140LHH9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC43.93■■■■■ 4.62
Gm35339A0A140LHH9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC43.93■■■■■ 4.62
Gm35339A0A140LHH9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC43.93■■■■■ 4.62
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms