Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-1A0A0G2JEV5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-1A0A0G2JEV5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-1A0A0G2JEV5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-1A0A0G2JEV5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav7-1A0A0G2JEV5 Gm10420-201ENSMUST00000121713 882 ntBASIC15.71■□□□□ 0.11
Trav7-1A0A0G2JEV5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-1A0A0G2JEV5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-1A0A0G2JEV5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7-1A0A0G2JEV5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7-1A0A0G2JEV5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Gm12366-201ENSMUST00000121722 873 ntBASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Gm5786-201ENSMUST00000085368 882 ntBASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav7-1A0A0G2JEV5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav7-1A0A0G2JEV5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-1A0A0G2JEV5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav7-1A0A0G2JEV5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-1A0A0G2JEV5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-1A0A0G2JEV5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-1A0A0G2JEV5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-1A0A0G2JEV5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav7-1A0A0G2JEV5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav7-1A0A0G2JEV5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav7-1A0A0G2JEV5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-1A0A0G2JEV5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-1A0A0G2JEV5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-1A0A0G2JEV5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-1A0A0G2JEV5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.65■□□□□ 0.1
Trav7-1A0A0G2JEV5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav7-1A0A0G2JEV5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav7-1A0A0G2JEV5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Trav7-1A0A0G2JEV5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav7-1A0A0G2JEV5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-1A0A0G2JEV5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-1A0A0G2JEV5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-1A0A0G2JEV5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-1A0A0G2JEV5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms