Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.56■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Gm9870-201ENSMUST00000063874 645 ntBASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-52A0A0A6YXC3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-52A0A0A6YXC3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ighv1-52A0A0A6YXC3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-52A0A0A6YXC3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.48■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-52A0A0A6YXC3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.48■□□□□ 0.07
Ighv1-52A0A0A6YXC3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.48■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-52A0A0A6YXC3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ighv1-52A0A0A6YXC3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.47■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms