Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-20A0A0A6YX66 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-20A0A0A6YX66 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.55■□□□□ 0.24
Ighv1-20A0A0A6YX66 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.55■□□□□ 0.24
Ighv1-20A0A0A6YX66 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-20A0A0A6YX66 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.55■□□□□ 0.24
Ighv1-20A0A0A6YX66 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.54■□□□□ 0.24
Ighv1-20A0A0A6YX66 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-20A0A0A6YX66 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-20A0A0A6YX66 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.54■□□□□ 0.24
Ighv1-20A0A0A6YX66 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-20A0A0A6YX66 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-20A0A0A6YX66 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-20A0A0A6YX66 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-20A0A0A6YX66 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ighv1-20A0A0A6YX66 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.53■□□□□ 0.24
Ighv1-20A0A0A6YX66 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-20A0A0A6YX66 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-20A0A0A6YX66 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-20A0A0A6YX66 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-20A0A0A6YX66 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-20A0A0A6YX66 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.53■□□□□ 0.24
Ighv1-20A0A0A6YX66 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Ighv1-20A0A0A6YX66 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.52■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-20A0A0A6YX66 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-20A0A0A6YX66 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-20A0A0A6YX66 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-20A0A0A6YX66 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.52■□□□□ 0.24
Ighv1-20A0A0A6YX66 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-20A0A0A6YX66 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.52■□□□□ 0.23
Ighv1-20A0A0A6YX66 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-20A0A0A6YX66 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-20A0A0A6YX66 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ighv1-20A0A0A6YX66 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.5■□□□□ 0.23
Ighv1-20A0A0A6YX66 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-20A0A0A6YX66 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ighv1-20A0A0A6YX66 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-20A0A0A6YX66 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-20A0A0A6YX66 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-20A0A0A6YX66 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-20A0A0A6YX66 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ighv1-20A0A0A6YX66 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-20A0A0A6YX66 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-20A0A0A6YX66 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-20A0A0A6YX66 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-20A0A0A6YX66 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-20A0A0A6YX66 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.48■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.48■□□□□ 0.23
Ighv1-20A0A0A6YX66 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-20A0A0A6YX66 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-20A0A0A6YX66 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.46■□□□□ 0.23
Ighv1-20A0A0A6YX66 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms