Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Cap2-205ENSMUST00000225824 1634 ntBASIC16.73■□□□□ 0.27
Trav18A0A075B656 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav18A0A075B656 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav18A0A075B656 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav18A0A075B656 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav18A0A075B656 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav18A0A075B656 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav18A0A075B656 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav18A0A075B656 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav18A0A075B656 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav18A0A075B656 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.72■□□□□ 0.27
Trav18A0A075B656 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.72■□□□□ 0.27
Trav18A0A075B656 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav18A0A075B656 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav18A0A075B656 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav18A0A075B656 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trav18A0A075B656 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav18A0A075B656 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav18A0A075B656 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav18A0A075B656 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav18A0A075B656 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav18A0A075B656 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav18A0A075B656 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav18A0A075B656 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Gm45444-201ENSMUST00000211394 898 ntBASIC16.7■□□□□ 0.26
Trav18A0A075B656 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav18A0A075B656 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav18A0A075B656 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav18A0A075B656 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav18A0A075B656 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav18A0A075B656 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav18A0A075B656 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav18A0A075B656 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav18A0A075B656 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav18A0A075B656 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav18A0A075B656 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav18A0A075B656 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav18A0A075B656 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav18A0A075B656 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav18A0A075B656 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav18A0A075B656 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav18A0A075B656 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav18A0A075B656 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav18A0A075B656 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav18A0A075B656 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav18A0A075B656 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.67■□□□□ 0.26
Trav18A0A075B656 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav18A0A075B656 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav18A0A075B656 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav18A0A075B656 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav18A0A075B656 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav18A0A075B656 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav18A0A075B656 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav18A0A075B656 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav18A0A075B656 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav18A0A075B656 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.66■□□□□ 0.26
Trav18A0A075B656 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav18A0A075B656 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav18A0A075B656 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms