Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-4-dv10A0A075B651 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-4-dv10A0A075B651 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-4-dv10A0A075B651 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-4-dv10A0A075B651 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav4-4-dv10A0A075B651 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-4-dv10A0A075B651 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-4-dv10A0A075B651 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-4-dv10A0A075B651 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-4-dv10A0A075B651 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-4-dv10A0A075B651 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-4-dv10A0A075B651 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-4-dv10A0A075B651 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-4-dv10A0A075B651 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-4-dv10A0A075B651 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-4-dv10A0A075B651 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-4-dv10A0A075B651 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-4-dv10A0A075B651 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-4-dv10A0A075B651 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-4-dv10A0A075B651 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-4-dv10A0A075B651 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-4-dv10A0A075B651 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-4-dv10A0A075B651 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-4-dv10A0A075B651 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-4-dv10A0A075B651 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-4-dv10A0A075B651 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav4-4-dv10A0A075B651 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-4-dv10A0A075B651 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav4-4-dv10A0A075B651 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-4-dv10A0A075B651 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-4-dv10A0A075B651 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav4-4-dv10A0A075B651 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav4-4-dv10A0A075B651 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-4-dv10A0A075B651 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-4-dv10A0A075B651 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-4-dv10A0A075B651 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav4-4-dv10A0A075B651 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-4-dv10A0A075B651 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-4-dv10A0A075B651 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-4-dv10A0A075B651 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-4-dv10A0A075B651 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav4-4-dv10A0A075B651 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-4-dv10A0A075B651 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-4-dv10A0A075B651 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms