Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Gm44428-201ENSMUST00000204474 874 ntBASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav14n-3A0A075B645 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav14n-3A0A075B645 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav14n-3A0A075B645 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav14n-3A0A075B645 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav14n-3A0A075B645 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Trav14n-3A0A075B645 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trav14n-3A0A075B645 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav14n-3A0A075B645 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav14n-3A0A075B645 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav14n-3A0A075B645 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav14n-3A0A075B645 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav14n-3A0A075B645 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav14n-3A0A075B645 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav14n-3A0A075B645 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav14n-3A0A075B645 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav14n-3A0A075B645 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav14n-3A0A075B645 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav14n-3A0A075B645 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav14n-3A0A075B645 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Trav14n-3A0A075B645 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14n-3A0A075B645 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14n-3A0A075B645 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14n-3A0A075B645 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14n-3A0A075B645 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14n-3A0A075B645 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14n-3A0A075B645 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav14n-3A0A075B645 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14n-3A0A075B645 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14n-3A0A075B645 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14n-3A0A075B645 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14n-3A0A075B645 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms