Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Gm6821-201ENSMUST00000107540 542 ntBASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav8-1A0A075B641 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8-1A0A075B641 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8-1A0A075B641 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav8-1A0A075B641 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8-1A0A075B641 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav8-1A0A075B641 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8-1A0A075B641 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8-1A0A075B641 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8-1A0A075B641 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav8-1A0A075B641 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8-1A0A075B641 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav8-1A0A075B641 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8-1A0A075B641 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8-1A0A075B641 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8-1A0A075B641 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8-1A0A075B641 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8-1A0A075B641 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav8-1A0A075B641 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav8-1A0A075B641 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Gm4799-201ENSMUST00000095396 657 ntBASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8-1A0A075B641 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8-1A0A075B641 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms