Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav6-7-dv9A0A075B639 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav6-7-dv9A0A075B639 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-7-dv9A0A075B639 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-7-dv9A0A075B639 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav6-7-dv9A0A075B639 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav6-7-dv9A0A075B639 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-7-dv9A0A075B639 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-7-dv9A0A075B639 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-7-dv9A0A075B639 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-7-dv9A0A075B639 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-7-dv9A0A075B639 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-7-dv9A0A075B639 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
Trav6-7-dv9A0A075B639 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-7-dv9A0A075B639 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-7-dv9A0A075B639 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-7-dv9A0A075B639 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.09■□□□□ 0.49
Trav6-7-dv9A0A075B639 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.09■□□□□ 0.49
Trav6-7-dv9A0A075B639 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav6-7-dv9A0A075B639 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav6-7-dv9A0A075B639 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6-7-dv9A0A075B639 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6-7-dv9A0A075B639 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Trav6-7-dv9A0A075B639 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Trav6-7-dv9A0A075B639 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.08■□□□□ 0.48
Trav6-7-dv9A0A075B639 Gm40881-201ENSMUST00000223397 166 ntBASIC18.08■□□□□ 0.48
Trav6-7-dv9A0A075B639 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-7-dv9A0A075B639 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-7-dv9A0A075B639 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-7-dv9A0A075B639 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-7-dv9A0A075B639 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav6-7-dv9A0A075B639 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-7-dv9A0A075B639 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.07■□□□□ 0.48
Trav6-7-dv9A0A075B639 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-7-dv9A0A075B639 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.07■□□□□ 0.48
Trav6-7-dv9A0A075B639 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav6-7-dv9A0A075B639 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-7-dv9A0A075B639 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-7-dv9A0A075B639 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-7-dv9A0A075B639 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-7-dv9A0A075B639 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-7-dv9A0A075B639 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.06■□□□□ 0.48
Trav6-7-dv9A0A075B639 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-7-dv9A0A075B639 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-7-dv9A0A075B639 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-7-dv9A0A075B639 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-7-dv9A0A075B639 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.04■□□□□ 0.48
Trav6-7-dv9A0A075B639 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav6-7-dv9A0A075B639 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-7-dv9A0A075B639 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-7-dv9A0A075B639 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Trav6-7-dv9A0A075B639 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav6-7-dv9A0A075B639 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms