Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav16d-dv11A0A075B617 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16d-dv11A0A075B617 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16d-dv11A0A075B617 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16d-dv11A0A075B617 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16d-dv11A0A075B617 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16d-dv11A0A075B617 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16d-dv11A0A075B617 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav16d-dv11A0A075B617 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16d-dv11A0A075B617 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16d-dv11A0A075B617 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16d-dv11A0A075B617 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trav16d-dv11A0A075B617 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav16d-dv11A0A075B617 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
Trav16d-dv11A0A075B617 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Gm44428-201ENSMUST00000204474 874 ntBASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 AC117769.4-201ENSMUST00000225679 685 ntBASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16d-dv11A0A075B617 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.94□□□□□ -0.02
Trav16d-dv11A0A075B617 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16d-dv11A0A075B617 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16d-dv11A0A075B617 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms