Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Gm18038-201ENSMUST00000197900 485 ntBASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Gm18893-201ENSMUST00000198416 943 ntBASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Gm270-201ENSMUST00000223010 976 ntBASIC10.94□□□□□ -0.66
Trim3Q9R1R2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.93□□□□□ -0.66
Trim3Q9R1R2 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim3Q9R1R2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim3Q9R1R2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms