Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm8598-201ENSMUST00000221184 836 ntBASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 AC158779.1-201ENSMUST00000228912 3861 ntBASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Gm42879-201ENSMUST00000198656 2214 ntBASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Gm44745-201ENSMUST00000206563 2723 ntBASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Trem1Q9JKE2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gm10748-202ENSMUST00000194396 2379 ntBASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Fam53b-206ENSMUST00000106168 3630 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gm8099-201ENSMUST00000200510 742 ntBASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gm20949-201ENSMUST00000206478 952 ntBASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gm18624-201ENSMUST00000220966 658 ntBASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trem1Q9JKE2 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms