Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 AC158779.1-201ENSMUST00000228912 3861 ntBASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.21□□□□□ -0.94
Smco4Q9JIS3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm14350-201ENSMUST00000116642 640 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm27243-201ENSMUST00000183964 521 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm27680-201ENSMUST00000184192 160 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm28693-202ENSMUST00000190758 331 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm5279-201ENSMUST00000199575 745 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Mzt1-203ENSMUST00000227948 952 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 AC117656.2-201ENSMUST00000224931 2215 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Gm38169-201ENSMUST00000191822 2539 ntBASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco4Q9JIS3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gm37307-201ENSMUST00000193663 2621 ntBASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms