Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Gm11663-201ENSMUST00000117888 290 ntBASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Gm11439-201ENSMUST00000118598 409 ntBASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Gm25881-201ENSMUST00000157783 103 ntBASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpne8Q9DC53 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpne8Q9DC53 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cpne8Q9DC53 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpne8Q9DC53 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpne8Q9DC53 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpne8Q9DC53 Btrc-209ENSMUST00000224478 2194 ntBASIC12.02□□□□□ -0.48
Cpne8Q9DC53 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpne8Q9DC53 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpne8Q9DC53 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.02□□□□□ -0.48
Cpne8Q9DC53 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Cpne8Q9DC53 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpne8Q9DC53 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Gm12196-201ENSMUST00000120954 262 ntBASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Gm7150-201ENSMUST00000122032 981 ntBASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Gm3329-201ENSMUST00000159873 556 ntBASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Gm18734-201ENSMUST00000172937 808 ntBASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Gm16505-201ENSMUST00000179981 232 ntBASIC12.02□□□□□ -0.49
Cpne8Q9DC53 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpne8Q9DC53 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms