Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm4294-201ENSMUST00000105169 614 ntBASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm11700-201ENSMUST00000119409 403 ntBASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm5468-202ENSMUST00000227851 682 ntBASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Stag1Q9D3E6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Gm12628-201ENSMUST00000122193 382 ntBASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Gm18065-201ENSMUST00000221395 526 ntBASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Gm25517-201ENSMUST00000083865 134 ntBASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Gm10263-201ENSMUST00000085163 300 ntBASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms