Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Gm23745-201ENSMUST00000104230 125 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Mir432-201ENSMUST00000157230 75 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Gm24992-201ENSMUST00000157412 130 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Gm21778-201ENSMUST00000178779 471 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Gm9625-201ENSMUST00000180422 955 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Mir326-201ENSMUST00000083637 95 ntBASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cldnd1Q9CQX5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.83□□□□□ -0.51
Cldnd1Q9CQX5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Cldnd1Q9CQX5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cldnd1Q9CQX5 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gm22937-201ENSMUST00000103954 131 ntBASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gm8302-201ENSMUST00000119217 852 ntBASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gm9166-201ENSMUST00000120293 561 ntBASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gm7985-201ENSMUST00000183329 981 ntBASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gm44814-201ENSMUST00000207018 434 ntBASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gm5449-201ENSMUST00000081132 357 ntBASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms