Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Gm37466-201ENSMUST00000195692 652 ntBASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Gm43962-201ENSMUST00000203898 190 ntBASIC11.25□□□□□ -0.61
Rnf111Q99ML9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf111Q99ML9 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.24□□□□□ -0.61
Rnf111Q99ML9 CT009764.1-201ENSMUST00000222260 483 ntBASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Gm5455-201ENSMUST00000058710 715 ntBASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf111Q99ML9 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms