Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm40879-201ENSMUST00000220759 612 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm12106-201ENSMUST00000116006 1200 ntBASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm13422-201ENSMUST00000118834 504 ntBASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm15620-201ENSMUST00000122949 270 ntBASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm20414-201ENSMUST00000172918 646 ntBASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm10807-201ENSMUST00000177134 795 ntBASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm39288-201ENSMUST00000210554 446 ntBASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm5468-202ENSMUST00000227851 682 ntBASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx6-1Q99MA9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms