Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.57□□□□□ -0.72
Lims1Q99JW4 Gm18753-201ENSMUST00000201000 566 ntBASIC10.57□□□□□ -0.72
Lims1Q99JW4 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Gm7940-201ENSMUST00000218195 769 ntBASIC10.57□□□□□ -0.72
Lims1Q99JW4 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.57□□□□□ -0.72
Lims1Q99JW4 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.57□□□□□ -0.72
Lims1Q99JW4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.57□□□□□ -0.72
Lims1Q99JW4 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.57□□□□□ -0.72
Lims1Q99JW4 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lims1Q99JW4 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.56□□□□□ -0.72
Lims1Q99JW4 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.56□□□□□ -0.72
Lims1Q99JW4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm25668-201ENSMUST00000157700 129 ntBASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm8343-201ENSMUST00000182705 994 ntBASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.56□□□□□ -0.72
Lims1Q99JW4 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm45865-201ENSMUST00000211815 945 ntBASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.56□□□□□ -0.72
Lims1Q99JW4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Lims1Q99JW4 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Lims1Q99JW4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.55□□□□□ -0.72
Lims1Q99JW4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.55□□□□□ -0.72
Lims1Q99JW4 AA914427-201ENSMUST00000193194 1166 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms