Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Mir453-201ENSMUST00000104732 82 ntBASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm13445-201ENSMUST00000121664 307 ntBASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm5257-201ENSMUST00000121823 790 ntBASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm21778-201ENSMUST00000178779 471 ntBASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm18776-201ENSMUST00000188833 654 ntBASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm43912-201ENSMUST00000204352 538 ntBASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm44647-201ENSMUST00000207402 428 ntBASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Gm6390-201ENSMUST00000215034 589 ntBASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd2Q99JR8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Gm15197-201ENSMUST00000120526 478 ntBASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Gm16030-201ENSMUST00000159098 603 ntBASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms