Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm44441-201ENSMUST00000203642 2475 ntBASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm11793-201ENSMUST00000120433 981 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm27501-201ENSMUST00000183599 107 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm28450-201ENSMUST00000187349 638 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm38266-201ENSMUST00000194931 421 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm3961-201ENSMUST00000204425 994 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm45177-201ENSMUST00000209104 2307 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.86□□□□□ -0.51
Pcdhb3Q91XZ7 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Gm28649-201ENSMUST00000189153 1581 ntBASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Gm14723-201ENSMUST00000118686 215 ntBASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Gm14704-201ENSMUST00000120300 874 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms