Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm37003-201ENSMUST00000194702 2827 ntBASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Gm24136-201ENSMUST00000083374 165 ntBASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Gm18473-201ENSMUST00000220543 868 ntBASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Itm2b-204ENSMUST00000228637 783 ntBASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc9Q8VC31 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 AC154220.1-201ENSMUST00000225033 1705 ntBASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Tmem184b-205ENSMUST00000228002 3315 ntBASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Gm28911-201ENSMUST00000188837 117 ntBASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc9Q8VC31 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc9Q8VC31 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc9Q8VC31 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc9Q8VC31 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms