Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Gm11783-201ENSMUST00000119549 885 ntBASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Gm37666-201ENSMUST00000194110 866 ntBASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Erich3-203ENSMUST00000189969 3460 ntBASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm23949-201ENSMUST00000104027 127 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm23596-201ENSMUST00000104304 132 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm12857-201ENSMUST00000117678 592 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm14071-201ENSMUST00000117817 509 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm11663-201ENSMUST00000117888 290 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm14130-201ENSMUST00000118417 987 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm28686-201ENSMUST00000187404 609 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm3332-201ENSMUST00000189337 928 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm45331-201ENSMUST00000209868 554 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.67□□□□□ -0.22
Cchcr1Q8K2I2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Mir1938-201ENSMUST00000158746 100 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms