Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Gm11783-201ENSMUST00000119549 885 ntBASIC10.93□□□□□ -0.66
Ska3Q8C263 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.93□□□□□ -0.66
Ska3Q8C263 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.93□□□□□ -0.66
Ska3Q8C263 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Mir8093-201ENSMUST00000185043 137 ntBASIC10.93□□□□□ -0.66
Ska3Q8C263 Gm38314-201ENSMUST00000195709 625 ntBASIC10.93□□□□□ -0.66
Ska3Q8C263 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.93□□□□□ -0.66
Ska3Q8C263 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Gm6867-201ENSMUST00000219165 425 ntBASIC10.93□□□□□ -0.66
Ska3Q8C263 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.93□□□□□ -0.66
Ska3Q8C263 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska3Q8C263 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Ska3Q8C263 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.93□□□□□ -0.66
Ska3Q8C263 BC043934-202ENSMUST00000185694 2356 ntBASIC10.92□□□□□ -0.66
Ska3Q8C263 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Ska3Q8C263 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
Ska3Q8C263 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ska3Q8C263 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ska3Q8C263 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.92□□□□□ -0.66
Ska3Q8C263 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.92□□□□□ -0.66
Ska3Q8C263 Gm5982-201ENSMUST00000196234 512 ntBASIC10.92□□□□□ -0.66
Ska3Q8C263 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.92□□□□□ -0.66
Ska3Q8C263 Gm45113-201ENSMUST00000207518 165 ntBASIC10.92□□□□□ -0.66
Ska3Q8C263 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.92□□□□□ -0.66
Ska3Q8C263 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.92□□□□□ -0.66
Ska3Q8C263 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Ntng1-201ENSMUST00000051253 327 ntBASIC10.92□□□□□ -0.66
Ska3Q8C263 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ska3Q8C263 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.92□□□□□ -0.66
Ska3Q8C263 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ska3Q8C263 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska3Q8C263 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska3Q8C263 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska3Q8C263 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska3Q8C263 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska3Q8C263 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska3Q8C263 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska3Q8C263 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ska3Q8C263 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.91□□□□□ -0.66
Ska3Q8C263 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska3Q8C263 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Ska3Q8C263 Gm13916-201ENSMUST00000117368 628 ntBASIC10.91□□□□□ -0.66
Ska3Q8C263 Gm13809-201ENSMUST00000117921 597 ntBASIC10.91□□□□□ -0.66
Ska3Q8C263 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.91□□□□□ -0.66
Ska3Q8C263 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.91□□□□□ -0.66
Ska3Q8C263 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.91□□□□□ -0.66
Ska3Q8C263 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ska3Q8C263 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ska3Q8C263 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.91□□□□□ -0.66
Ska3Q8C263 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms